Zhang Ning
School
School of Precision Instrument and Optoelectronics Engineering
Professional Title
Lecturer
Discipline
Bioinformatics
Contact Information
zhni@tju.edu.cn
Department of Biomedical Engineering, Tianjin University
Education Background
- Ph.D| Nankai University| Bioinformatics| 2010
- Master's| Nankai University| Bioinformatics| 2007
- Bachelor's degree| Tianjin Normal University| Biology, English| 2004
Research Interests
- rotein post-translational modifications; Protein structure and function predictions; Identifications of virus infection and cancer related genes; Software and computational tools development; Database design
Education Background
Positions & Employments
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2016.12-2017.11
Institute for Glycomics | Griffith University, Australia | Visiting Scholar -
2012.4-2017.11
Department of Biomedical Engineering | Tianjin University | Lectrurer -
2010.7-2012.4
College of Mathematical Science | Nankai University | Post-Doctor
Academic Achievements
- Papers
- [1] Lei Chen, Jing Lu, Ning Zhang*, Tao Huang*, Yu-Dong Cai*; A hybrid method for prediction and repositioning of drug Anatomical Therapeutic Chemical classes; Molecular BioSystems; 10(4); 2014; 868-77
- [2] Guohua Huang, Yuchao Zhang, Lei Chen*, Ning Zhang*, Tao Huang*, Yu-Dong Cai*; Prediction of Multi-Type Membrane Proteins in Human by an Integrated Approach; PLoS ONE; 9(3); 2014; e93553
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- [3] Ning Zhang, Min Jiang, Tao Huang*, Yu-Dong Cai*; Identification of Influenza A/H7N9 Virus Infection-Related Human Genes Based on Shortest Paths in a Virus-Human Protein Interaction Network.; BioMed Research International; Volume 2014; 2014; Article ID 239462
- [4] Yu Guo, Yuanming Feng, Jian Sun, Ning Zhang, Wang Lin, Yu Sa, Ping Wang*; Automatic Lung Tumor Segmentation on PET/CT Images Using Fuzzy Markov Random Field Model; Computational and Mathematical Methods in Medicine; Volume 2014; 2014; Article ID 401201
- [5] Guohua Huang, Lin Lu, Kaiyan Feng, Jun Zhao, Yuchao Zhang, Yaochen Xu, Ning Zhang, Bi-Qing Li, Weiping Huang, Yu-Dong Cai*; Prediction of S-Nitrosylation Modification Sites Based on Kernel Sparse Representation Classification and mRMR Algorithm; BioMed Research International; Volume 2014; 2014; Article ID 438341
- [6] Ning Zhang, You Zhou, Tao Huang, Yu-Chao Zhang, Bi-Qing Li, Lei Chen, Yu-Dong Cai*; Discriminating between Lysine Sumoylation and Lysine Acetylation Using mRMR Feature Selection and Analysis; PLoS ONE; 9(9); 2014; e107464
- [7] Ning Zhang, Tao Huang*, Yu-Dong Cai*; Discriminating between deleterious and neutral non-frameshifting indels based on protein interaction networks and hybrid properties; Molecular Genetics and Genomics; 290(1); 2015; 343-52
- [8] Yang Shu, Ning Zhang (Co-First Author), Xiangyin Kong*, Tao Huang*, Yu-Dong Cai*; Predicting A-to-I RNA Editing by Feature Selection and Random Forest; PLoS ONE; 2014; 9(10): e110607
- [9] Xu Yang, YuanMing Feng*, Yahui Liu, Ning Zhang, Wang Lin, Yu Sa, XinHua Hu; A quantitative method for measurement of HL-60 cell apoptosis based on diffraction imaging flow cytometry technique; Biomed Opt Expres; 5(7); 2014; 2172-83
- [10] Yuanming Feng, Ning Zhang, Kenneth M. Jacobs, Wenhuan Jiang, Li V. Yang, Zhigang Li, Jun Zhang, Jun Q. Lu, Xin-Hua Hu*; Polarization Imaging and Classification of Jurkat T and Ramos B Cells Using a Flow Cytometer; CYTOMETRY PART A; 85; 2014; 817-826
- [11] You Zhou, Ning Zhang (Co-First Author), Bi-Qing Li, Tao Huang*, Yu-Dong Cai*, Xiang-Yin Kong*; A method to distinguish between lysine acetylation and lysine ubiquitination with feature selection and analysis; Journal of Biomolecular Structure and Dynamics; 33(11); 2015; 2479-90
- [12] Chunmei Yang*, Ning Zhang, Yu Guo and Yuanming Feng*; Modeling Intracellular Ca2+ Transient Induced by Low-Intensity Ultrasound; Current Bioinformatics; 10; 2015; 79-84
- [13] Pei-Wei Zhang, Lei Chen, Tao Huang*, Ning Zhang*, Xiang-Yin Kong*, Yu-Dong Cai*; Classifying Ten Types of Major Cancers Based on Reverse Phase Protein Array Profiles; PLOS ONE; 10(3); 2015; e0123147
- [14] You Zhou, Tao Huang, Guohua Huang, Ning Zhang*, XiangYin Kong*, Yu-Dong Cai*; Prediction of protein N-formylation and comparison with N-acetylation based on a feature selection method; Neurocomputing; 217; 2016; 53-62
- [15] Ning Zhang, Meng Wang, Peiwei Zhang, Tao Huang*; Classification of cancers based on copy number variation landscapes; Biochim Biophys Acta; 1860(11 Pt B); 2016; 2750-2755
- [16] Guohua Huang, Chen Chu, Tao Huang, Xiangyin Kong, Yunhua Zhang, Ning Zhang*, Yu-Dong Cai*; Exploring Mouse Protein Function via Multiple Approaches; PLoS ONE; 11(11); 2016; e0166580
- [17] Ning Zhang, Yu Sa, Yu Guo, Wang Lin, Ping Wang, Yuanming Feng*; Discriminating Ramos and Jurkat Cells with Image Textures from Diffraction Imaging Flow Cytometry Based on a Support Vector Machine; Current Bioinformatics; 2016.
- [18] JianZhao Gao, XueWen Tao, Jia Zhao, YuanMing Feng*, YuDong Cai*, Ning Zhang*; Computational prediction of protein epsilon lysine acetylation sites based on a feature selection method. Comb Chem High Throughput Screen. 20; 2017;
- [19] HuanHuan Cao, YuHang Zhang, Jia Zhao, LiuCun Zhu, Yi Wang, JiaRui Li*, YuanMing Feng*, Ning Zhang*; Prediction of the Ebola virus infection related human genes using protein-protein interaction network; Comb Chem High Throughput Screen; 20, 2017
- [20] Wang S, Zhang YH, Zhang N, Chen L, Huang T, Cai YD. Recognizing and predictingthioether bridges formed by lanthionine and β-methyllanthionine in lantibiotics using a random forest approach with feature selection; Comb Chem High Throughput Screen, 2017.