School of Life Sciences
Professor
lizhi.mi@tju.edu.cn
School of Life Sciences, Tianjin University, Tianjin, China
300072
Dr. Mi is interested in the structural and mechanistic basis of developmental signaling, which is important in stem cell biology, cancer metastasis, and regenerative medicine. Especially, he focuses on understanding how the activities of key developmental signaling molecules are regulated by extracellular micro-enviroments, and how these molecules are recognized by cell surface receptors to engage with intracellular signaling cascades through lipid membrane. In addition, he wants to translate his structural understanding into therapeutic development against cancer and degenerative diseases.
Conformational coupling through a single pass transmembrane domain in receptor tyrosine kinases
We focused on the understanding how external signals are recognized by cell surface receptors and transmitted through lipid membrane to engage intracellular signaling. Specifically, we want to understand how ligand recognition is coupled to intracellular signaling in an intact receptor, especially in those receptors with a single-pass transmembrane domain. As the first step to appreciate this question, we visualized, in a nearly full-length EGF receptor, the communication between the ectodomain and the cytoplasmic domain by electron microscopy. We observed that one conformation of liganded EGF receptor ectodomain can be coupled to multiple cytoplasmic (kinase) domain arrangements. Moreover, the activated, asymmetric kinase domain dimer can be coupled to two ectodomain association states depending on the presence of ligand (Mi et. al., NSMB 2011). This unexpected loose coupling across the membrane facilitates regulation of the EGF receptor function in the juxtamembrane and cytoplasmic environments.
Figure 1: Functional reconstitution of membrane proteins into lipid nanodiscs. (a) raw EM image of reconstituted empty nanodiscs. (b) class averages of the EGF receptors reconstituted in nanodiscs. (c,d) Schematic diagrams of the reconstituted empty (c) and EGFR-loaded (d) nanodiscs. In my studies, the EGF receptors reconstituted in nanodiscs are structurally and functionally stable.
- Ph.D.| University of Virginia| Biophysics| 2004
- M.S.| Tsinghua Universiy| Biophysics| 1996
- B.S.| Peking University| Physics| 1991
- Conformational coupling through a single pass transmembrane domain in receptor tyrosine kinases
- Structural and functional basis for developmental signaling
- Chinese Cell Biology Society, Chapter of Tianjin, Board Counsellor
- Chinese Biophysical Society, Chapter of Cryo-EM, Board Counsellor
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2014.10-2019.12
School of Life Sciences | Tianjin University | Professor  -
2005.1-2014.9
Immune Disease Institute | Harvard Medical School | Research Fellow  -
2004.1-2005.1
Department of Pharmacology | University of Virginia | Research Associate  -
1997.8-2003.12
Biophysics Program | University of Virginia | Research Assistant  -
1993.8-1997.7
Department of Biology | Tsinghua University | Research Assistant  -
1991.8-1993.7
Department of Basic Sciences | Tianjin Sino-German Vocational Institute of Technology | Teaching Assistant 
- Papers
- [1] Nanobodies: from structure to applications in non-injectable and bispecific biotherapeutic development
- [2] PDGF-D Prodomain Differentially Inhibits the Biological Activities of PDGF-D and PDGF-B
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- [3] Paradoxical Mitophagy Regulation by PINK1 and TUFm
- [4] Li-Zhi Mi, Christopher T. Brown, Yijie Gao, Yuan Tian, Viet Le, Thomas Walz, and Timothy A. Springer Structure of non-latent pro-bone morphogenetic protein 9 PNAS 2015 112(12):3710-5
- [5] Chafen Lu*, Li-Zhi Mi*, Thomas Schurpf, Thomas Walz, Timothy A. Springer Mechanisms for kinase-mediated dimerization of the EGF receptor J. Biol. Chem. 2012 287(45):38244-53 (* equal contribution) Recommended by "Faculty of 1000"
- [6] Li-Zhi Mi, Chafen Lu, Zongli Li, Noritaka Nishida, Thomas Walz, Timothy A. Springer Simultaneous visualization of the extracellular and cytoplasmic domains of the epidermal growth factor receptor Nat Struct Mol Biol 2011 18(9):984-9 Highlighted by Nat Struct Mol Biol See “News and Views” by Nicholas J Bessman and Mark A Lemmon: Nat Struct Mol Biol 19(1):1-3
- [7] Li-Zhi Mi*, Michael J. Grey*, Noritaka Nishida, Thomas Walz, Chafen Lu, Timothy A. Springer Functional and structural stability of the epidermal growth factor receptor in detergent micelles and phospholipid nanodiscs Biochemistry 2008 47(39):10314-10323 (* equal contribution)
- [8] John F. Flanagan*, Li-Zhi Mi*, Maksymilian Chruszcz, Marcin Cymborowski, Katrina L. Clines, Youngchang Kim, Wladek Minor, Fraydoon Rastinejad and Sepideh Khorasanizadeh Double chromodomains cooperate to recognize the methylated histone H3 tail Nature 2005 438(7071):1181-5 (* equal contribution) See “News and Views” by Joel C. Eissenberg and Sarah C. R. Elgin: Nature 438:1090-1091 Recommended by “Faculty of 1000”
- [9] Li-Zhi Mi, Srikripa Devarakonda, Joe M. Harp, Qing Han, Roberto Pellicciari, Timothy M. Willson, Sepideh Khorasanizadeh, and Fraydoon Rastinejad Structure basis for binding and activation of the bile acid receptor FXR Mol. Cell 2003 11(4):1093-1100 See “Preview” by Kendall W. Nettles and Geoffrey L. Greene: Mol. Cell 11(4):850-851 Recommeded by “Faculty of 1000”
- [10] L. Deforche, E. Roose, A. Vandenbulcke, N. Vandeputte, H.B. Feys, T.A. Springer, L.Z.Mi, J.Muia, J.E. Sadler, K. Soejima, H. Rottensteiner, H. Deckmyn, S.F. De Meyer, and K. Vanhoorelbeke Linker regions and flexibility around the metalloprotease domain account for conformational activation of ADAMTS13 J Thromb Haemost 2015 13(11):2063–2075
- [11] Xianchi Dong, Li-Zhi Mi, Jianghai Zhu, Wei Wang, Ping Hu, Bing-Hao Luo, Timothy A. Springer αVβ3 Crystal Structures and their Functional Implications Biochemistry 2012 51(44):8814-28
- [12] Michael B. Doud, Adem C. Koksal, Li-Zhi Mi, Gaojie Song, Chafen Lu, and Timothy A. Springer Unexpected fold in the circumsporozoite protein target of malaria vaccines PNAS 2012 109(20):7817-22
- [13] Xing Chen, Yamei Yu, Li-Zhi Mi, Thomas Walz, Timothy A. Springer, Molecular basis for complement recognition by integrinα Xβ2 PNAS 2012 109(12): 4586-9
- [14] Yamei Yu, Jianghai Zhu, Li-Zhi Mi, Thomas Walz, Hao Sun, JianFeng Chen, Timothy A. Springer Structural specializations of α4β7 Integrin that Mediates Rolling Adhesion J. Cell Biol. 2012 196(1):131-46
- [15] Minglong Shi, Jianghai Zhu, Rui Wang, Xing Chen,Li-Zhi Mi,Thomas Walz, Timothy A. Springer Structural basis for latency and activation of TGFβ superfamily Nature 2011 474(7351):343-9
- [16] Can Xie*, Jianghai Zhu*, Xing Chen, Li-Zhi Mi, Noritaka Nishida, Timothy A. Springer Structure of an integrin with an αI domain, complement receptor type 4 The EMBO Journal 2010 29(3):666-679 (* equal contribution)
- [17] Christine S. Wright, Li-Zhi Mi and Fraydoon Rastinejad Crystal Structure Analysis of Phosphatidylcholine-GM2-Activator Product Complexes: Evidence for Hydrolase Activity Biochemistry 2005 44(41):13510-21
- [18] Christine S. Wright, Li-Zhi Mi and Fraydoon Rastinejad Evidence for Lipid Packaging in the Crystal Structure of GM2-Activator Complex with Platelet Activating Factor J. Mol. Biol. 2004 342(2):585-92
- [19] Xuehui Chen, Thomas Doohun Kim, Christopher V. Carman, Li-Zhi Mi, Gang Song, Timothy A. Springer Structural plasticity in Ig superfamily domain 4 of ICAM-1 mediates cell surface dimerization PNAS 2007 104(39): 15358-15363
- [20] Sergei V. Shilov, Mark S. Braiman and Li-Zhi Mi Mid-IR evanescent-wave sensors for tiny biological samples Proc. of SPIE 2000 3918: 202-207
- [21] Mark S. Braiman and Li-Zhi Mi Tapered quasi-planar germanium waveguides for Mid-IR chemical and biochemical sensing Proc. of SPIE 1999 3540: 146-152
- [22] Senfang Sui, Yutong Sun and Li-Zhi Mi Calcium-dependent binding of rabbit C reactive protein to supported lipid monolayers containing exposed phosphorylcholine group Biophys J. 1999 76(1):333-341
- [23] Li-Zhi Mi, Hongwei Wang and Senfang Sui Interaction of rabbit C-reactive proteinwith phospholipid monolayers studied by microfluorescence film balance with an externally applied electric field Biophys J. 1997 73(1):446- 451
- Honors & Awards
- [1] Peking University, Outstanding Student Scholarship, 1990
- [2] Tsinghua University, ”Yiqi Mei” President Fellowship, 1995
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- [3] Tsinghua University, The Second Prize in Challenger Cup Scientific Competition, 1996
- [4] University of Virginia, Dean’s Fellowship, 1997–1999
- [5] Harvard Medical School, Poster Award in 2007 Immune Disease Institute summer retreat, 2007
- [6] Harvard Medical School, Poster Award in 2010 Immune Disease Institute summer retreat, 2010